Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904839.1_cds_XP_016454958.1_48927
CDS Infomation

[gene=LOC107779124] [db_xref=GeneID:107779124] [protein=protein HESO1-like isoform X7] [protein_id=XP_016454958.1] [location=complement(join(32956..33819,33900..34004,34073..34179,34544..34589,35673..35768,36445..36629,36724..36771,36881..37057,39009..39033))] [gbkey=CDS]
Sequence

ATGTCTAAGGTTTATCGCGTTAAAGGGCGTTCTGGTAATATTCCTGTTGTGGAGGAGTTT
GGATCTTTCGTGATGGATCTATTCCATTCAAAGAGTGACCTAGATCTATCTGTTAATTTT
GACAACAGTTCAGTTAAGGTTTCACATGAGAAGAAGATTCAGACTCTCCGGAAATTTGCA
AGGAAGTTATATGCACTTCAAAGACAAATTTTAGAAGAAAAGTTGATTAACTGCTCTGAT
TGTTTTCTAGGAGATGGGCATGTTTCTGGCGTTCATCCAATAACAGCTGCCAAGGTGCCC
ATTCTGAAAGTTGTTGATTGTGGAACGAAAATTGAGTGCGATATATCAGTTGAAAACAGG
GATGGAGTTTCAAAGTCTAAGATAATCCACATGATTTGTTCACTCGATGAAAGGTTTCAG
AAGCTGAGCTTTTTGATGAAAGCTTGGGCAAAAGCTCAGAATATTAATAGCTCAAGAGAC
AAAACTTTGAACTCATTATCTATAATACTTTTGGTTGCTTTTCATTTACAGACACGAAAT
CCTCCAATACTACCGCCATTTTCTGCCATATTAAAAGATGGCTCTGATCCTGATTCAGTG
GAAAAGTCGTTGAATAAGTTTGTGAACTATGGGAAGAGCAACAAAGAGTCAGTGGCTGAG
CTGCTAGTTACTTTAATAATCAAGTTATTATCGGTCGAGAAACTATGGGACAAAGGACTA
TGTGCAAGCACCTATGAAGCATCTTGGCTATCTAAAACATGGGATTCTAAAGTTTGCTGC
ATCAGTGTAGTTGAGGATTTCACAGATCAATCTCAAAATGTCGCAAGGGCTGTTGGGAAA
GGAGAAGTAAAGCAGATATACAAGTGTATCCAGCGTACTAGCGAATACATCTCTGCTTAT
ATGGATGGCCTTGTCGAATTACCAGCGTTAAGATATCAATTATTCCGCCATGCTGCTACT
CCCTTTCAAGTGGATTCTCAGACAAGTAACATTGAAGAAAATGGAAATAGCATTGCACTT
CCTTGTAGAGATATCATGAATAAGGAGGATCAAAGTACAGAAGGCCAGAAAGAAAGTCAG
GGGGCTATACCTTCTGAACCTATCACGACGAAAAGGAAATGGTCTAGCGAAGGTTGGGAA
GGATTAGCTTCTGAACCTATCACGACCAAGAAGAAATGGTCAACCGAAGGTTGGGAAGGA
TTAGCTTCTGAACCTATCACGACTAAAAGAAAATGGTCTACCGAAGGTTGGAAAGAATTA
CCTTCCGAACCTATCACGGCTAAAAAGAAATGGTCTAGCGAAGGTTGGGAAGGATTAGCT
TCTGAATCTATCACGACCAAGAGGAAATGGTCTACCGAGGGTTGGGAAGGATTAGCTTCT
AAACCTATCACGACCAAGAGGAAATGGTCTACTGAAGGTTGGGAAGGATTATCTTCAGTG
AGTTGGGGACTGTCAAAGGAGGACGGTGTACAACCTGACTCTCTCTGGACAAAAAGAAAA
AGATCAGAAGAAACCACAGGAGGAACTTCTTCTGCTCAATGGTTGAGAAAATCAGACACA
AAACGTTGGTTCGCAAGAAAGAACAACAATAAGTGTGCACCTAAGGCTAAGAGGTCAAAC
ACACATACACGAGGTTGGGGAGGAAGACGATGA

Peptide Sequence

PEP ID

XP_016454958.1
PEP Infomation

PREDICTED: protein HESO1-like isoform X7 [Nicotiana tabacum]
Sequence

MSKVYRVKGRSGNIPVVEEFGSFVMDLFHSKSDLDLSVNFDNSSVKVSHEKKIQTLRKFA
RKLYALQRQILEEKLINCSDCFLGDGHVSGVHPITAAKVPILKVVDCGTKIECDISVENR
DGVSKSKIIHMICSLDERFQKLSFLMKAWAKAQNINSSRDKTLNSLSIILLVAFHLQTRN
PPILPPFSAILKDGSDPDSVEKSLNKFVNYGKSNKESVAELLVTLIIKLLSVEKLWDKGL
CASTYEASWLSKTWDSKVCCISVVEDFTDQSQNVARAVGKGEVKQIYKCIQRTSEYISAY
MDGLVELPALRYQLFRHAATPFQVDSQTSNIEENGNSIALPCRDIMNKEDQSTEGQKESQ
GAIPSEPITTKRKWSSEGWEGLASEPITTKKKWSTEGWEGLASEPITTKRKWSTEGWKEL
PSEPITAKKKWSSEGWEGLASESITTKRKWSTEGWEGLASKPITTKRKWSTEGWEGLSSV
SWGLSKEDGVQPDSLWTKRKRSEETTGGTSSAQWLRKSDTKRWFARKNNNKCAPKAKRSN
THTRGWGGRR

Transcript Sequence

Gene sequence data has not been registered.